2017 - Dr. S. Juzėnas Ist place winner in the contest LSMU „PhD Student 2017“.

2017 - PhD student G. Streleckienė was awarded for the best oral presentation by Scientific committee of  Fit for the Future in Gastroenterology Meeting (Berlin, Germany).

2016 - The Kaunas City Scientist Award was awarded for achievements in the field of physical, biomedical, agricultural and technological sciences to prof. habil. dr. L. Kupčinskas.

2016 - assoc. prof. J. Kupčinskas was given the name of the most promising medical doctor in Kaunas city.

2016 - dr. J. Skiecevičienė IIIrd place winner in the contest LSMU „Junior Scientist 2016“.

2015 - dr. A. Jasukaitienė (Jakštaitė) was awared for the best paper by Federtion of european physiological society and the baltic phusiological society (FEPS)

2015 - Assoc. prof. J. Kupčinskas IInd place winner in the contest LSMU „Junior Scientist 2015“.

2014 - prof. A. Gulbinas was awarded for the best poster and oral presentations by the organizing committee of the 11th World Congress of the International Hepato-Pancreato-Biliary Association (IHPBA World Congress 2014).

2014 – dr. A. Jasukaitienė (Jakštaitė) was awarded with the National Scholar Award be the Scientific committee of United European Gastroenterology (UEG) Week.

2013 - dr. J. Skiecevičienė Ist place winner in the contest LSMU „Junior Scientist 2013“.

2012 - prof. habil. dr. L. Kupčinskas was selected as the most prominent scientist in the field of medicine from year 2002-2012 by the magazine "Veidas" in the project "Mini-Nobel 2012".

2011 - prof. habil. dr. L. Kupčinkas was awarded the Order of the Lithuanian Grand Duke Gediminas (Class 5)

2011 - dr. J. Skiecevičienė recieved the award for the best disertation in biomedical field from the the Lithuanian Young Scientists' Union.
2010 - prof. habil. dr. L. Kupčinskas received Lithuanian Science Award for the work "Digestive system diseases: the role of microflora and genetic factors in etiopathogenesis of diseases, new aspects of diagnosis and treatment", year 1996–2009.

2010 - dr. J. Skiecevičienė (Šventoraitytė) Ist place winner in the contest LSMU „PhD Student 2010“.

2009 - prof. habil. dr. L. Kupčinskas given the name of the honorary Lithuanian medical doctor and received  a symbol of honor.

2008 - prof. habil. dr. L. Kupčinskas received award "The Tree of Life" from the Lithuanian Academy of Sciences, Ministry of Health and the Confederation of Industrialists for his scientific work in the field of medicine and natural sciences.